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[fold] working 3di hog inference. HOG batching deactivated Docker Image CI #515: Commit d133285 pushed by sinamajidian
3m 33s fold
fold
3m 33s
[fold] working 3di hog inference - pdb not anymore Docker Image CI #514: Commit 5c59f99 pushed by sinamajidian
3m 33s fold
fold
3m 33s
[fold] creating 3di root HOG files Docker Image CI #513: Commit 15bfc6f pushed by sinamajidian
3m 29s fold
fold
3m 29s
[fold] add 3di testdata Docker Image CI #512: Commit 8a5cab6 pushed by sinamajidian
3m 23s fold
fold
3m 23s
[fold] Use sequence mode when no pdbs for a gene tree. Docker Image CI #511: Commit 742ceff pushed by sinamajidian
3m 44s fold
fold
3m 44s
[WIP] remove toytree issue with numpy version in omamer, species fold… Docker Image CI #510: Commit 919400c pushed by sinamajidian
4m 1s fold
fold
4m 1s
[WIP] copying foldtree scripts, fixing lines Docker Image CI #509: Commit 3c85fa6 pushed by sinamajidian
3m 20s fold
fold
3m 20s
[WIP] adding fold-seq mode, fixing lines Docker Image CI #508: Commit 169a957 pushed by sinamajidian
3m 55s fold
fold
3m 55s
adding code to print nwk strings to compare runtime & results Docker Image CI #507: Commit 67a36b7 pushed by biosoft-research
4m 35s distances
distances
4m 35s
Adding distance fitting delta 1e-3, 1e-6, 1e-9 for testing Docker Image CI #506: Commit 5349de3 pushed by biosoft-research
4m 31s distances
distances
4m 31s
fixing loading of species -> gene data for xml writing Docker Image CI #505: Commit ed39d8f pushed by biosoft-research
4m 15s distances
distances
4m 15s
initial commit switching from write_pairwise_distances --> estimate_d… Docker Image CI #504: Commit 6154ba1 pushed by biosoft-research
4m 17s distances
distances
4m 17s
Merge remote-tracking branch 'refs/remotes/origin/distances' into dis… Docker Image CI #503: Commit fe7772c pushed by biosoft-research
4m 23s distances
distances
4m 23s
[wip] update Docker Image CI #502: Commit 0dad52f pushed by sinamajidian
3m 21s fold
fold
3m 21s
add a small script to convert rec id in hog fasta nf-test CI #73: Commit 28296a4 pushed by sinamajidian
5m 35s dev
dev
5m 35s
add a small script to convert rec id in hog fasta Docker Image CI #501: Commit 28296a4 pushed by sinamajidian
4m 28s dev
dev
4m 28s
Merge pull request #89 from DessimozLab/copilot/merge-all-requests Docker Image CI #500: Commit 29f95f5 pushed by alpae
4m 43s main
main
4m 43s
Merge pending dependabot GitHub Actions bumps into dev nf-test CI #72: Pull request #89 synchronize by alpae
5m 49s copilot/merge-all-requests
copilot/merge-all-requests
5m 49s
Merge pending dependabot GitHub Actions bumps into dev Docker Image CI #499: Pull request #89 synchronize by alpae
4m 8s copilot/merge-all-requests
copilot/merge-all-requests
4m 8s
Bump GitHub Actions dependencies from open dependabot PRs (#84-#88) Docker Image CI #498: Commit 45c0ab7 pushed by alpae
4m 27s copilot/merge-all-requests
copilot/merge-all-requests
4m 27s
Addressing comment on PR #89 Copilot coding agent #3: by Copilot AI
2m 13s copilot/merge-all-requests
copilot/merge-all-requests
2m 13s
Sync workflow files to dev branch base before merging Docker Image CI #496: Commit 65c95ce pushed by Copilot AI
Action required copilot/merge-all-requests
copilot/merge-all-requests
Action required
Addressing comment on PR #89 Copilot coding agent #2: by Copilot AI
5m 29s copilot/merge-all-requests
copilot/merge-all-requests
5m 29s
removes nextflow_slurm.config (legacy) Docker Image CI #495: Commit 629d6b0 pushed by alpae
4m 14s dev
dev
4m 14s
removes nextflow_slurm.config (legacy) nf-test CI #70: Commit 629d6b0 pushed by alpae
5m 39s dev
dev
5m 39s